Time | Item | Who | Notes |
---|
| GrainGenes | Taner | update |
| T3 loading Eduard's data | | review line names 2019_Diversity_90K - 1200 new markers, 56 accessions with no passport data 2019_Diversity_GBS JBrowse - could create track with present absence for each SNP |
| T3 tools | | Subset markers by polymorphisms - no problem with 1000 accessions, performance is only limited by the start and stop range Knetminer - Keywan noticed a problem when linking with TO number Download - use permanent link for GBS files |
| triticumbase | | - redesign home page
which genotype experiments to load allow users to download genotype data (which formats) - test loading of large genotype data files or use hdf5 with GOBII
|
| T3Genome Canada proposal | | convert big VCF to hdf5 (check with GOBII) ask Star (ask second)
ask Lucas what is largest VCF that I can load (ask first)
check Akanov JBrowse (which data) |
| WheatCAP | | Primer Design Edwards 90K (not published), ask students if this data will be useful, how does this relate to wheatcap parents Shiny App (ask Noah for update) create accounts so users can test features. |