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Performance speeds of Synology Box used on Matrix

From: Lulu Zhu

Sent: Friday, July 18, 2014 3:52 PM

To: Chemistry IT Admin

Subject: RE: NAS and local drive speed

This is right one. Sorry for the confusing.

Re-test head node to local 4T drive:

  • write speed 165M/sec
  • rewrite speed 82M/s
  • read speed 251M/s

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From: Lulu Zhu

Sent: Friday, July 18, 2014 1:18 PM

To: Chemistry IT Admin

Subject: RE: NAS and local drive speed

The previous results for NAS-iscsi setting. Here is the result from compute nodes (or from head node) to NAS-nfs:

  • write speed 104 M/sec
  • rewrite speed 51 M/sec
  • read speed 107M/sec

I use this command to do the test:

bonnie++ -n 0 -u 0 -r `free -m | grep 'Mem:' | awk '{print $2}'` -s $(echo "scale=0;`free -m | grep 'Mem:' | awk '{print $2}'`*2" | bc -l) -f -b -d /users

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From: Lulu Zhu

Sent: Thursday, July 17, 2014 2:01 PM

To: Chemistry IT Admin

Subject: RE: NAS and local drive speed

Here are the test results from computer nodes writing/reading to NAS or drive on headnode:

Size of file for I/O test is 126GB

NAS result:

  • write speed 96.17M/sec
  • rewrite speed 27.44M/s
  • read speed 76.52M/s

4TB drive result:

  • write speed 46.22M/sec
  • rewrite speed 31.9M/s
  • read speed 104M/s

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From: Lulu Zhu

Sent: Wednesday, July 09, 2014 2:56 PM

To: Chemistry IT Admin

Subject: RE: NAS and local drive speed

Local SSD drive result:

  • write speed 253M/sec
  • rewrite speed 129M/s
  • read speed 394M/s

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From: Lulu Zhu

Sent: Wednesday, July 09, 2014 12:44 PM

To: Chemistry IT Admin

Subject: NAS and local drive speed

Size of file for I/O test is 63GB

NAS result:

  • write speed 108M/sec
  • rewrite speed 54.7M/s
  • read speed 156M/s

local drive result:

  • write speed 168M/sec
  • rewrite speed 100M/s
  • read speed 258M/s

Compare the write speed between Synology Box and local drive on 755

Numbers from Lulu Zhu, published Wednesday, May 14, 2014 11:12 AM

The speed of writing one 1GB file to Synology Box:
1073741824 bytes (1.1 GB) copied, 6.19986 s, 173 MB/s

The speed of writing one 1GB file to local drive:
1073741824 bytes (1.1 GB) copied, 7.70751 s, 139 MB/s (local)

The speed of writing two 1GB files to Synology Box:
1073741824 bytes (1.1 GB) copied, 16.7387 s, 64.1 MB/s (two files)

The speed of writing two 1GB files to local drive:
1073741824 bytes (1.1 GB) copied, 18.3784 s, 58.4 MB/s (two files)

The speed of reading one 1GB file from local drive:
1073741824 bytes (1.1 GB) copied, 0.273401 s, 3.9 GB/s

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