Date
Attendees
Goals
Discussion items
Time | Item | Who | Notes |
---|---|---|---|
Monday | iPTMnet | Cecilia Arighi |
|
Protein Information Resource (PIR) | Andrew Nightingale |
| |
TopAnat | Frederic Bastian |
| |
Glycobiolog | Jean-Philippe Gourdine |
| |
Cellosaurus | Amos Bairoch |
| |
OBO Foundry | Lynn Schriml |
| |
ontology mapping | Marie-Angelique Laporte |
| |
Tuesday | WikiData | Andra Waagmeester | showed example of disease ontology in 100's of languages |
protein2GO | |||
rethinking databases | Ivan Erill | domain specific databases work as submission portals, then transfer to mainstream repository. specific databases will die when funding goes away. CollecTF | |
Thursday | PhenoPackets | hierarchiacal JSON
| |
subscription-based funding model | Tanya Berardini | Arabidopsis Information Resource (TAIR) lost funding, now subscription based |
Action items
- Clayton L Birkett - Marie-Angelique offered to help us convert from CO to TO
- Clayton L Birkett - should T3 be responsible for submitting data to NCBI/Ensembl, which data?
- Clayton L Birkett - collaborate with Texas PI who is doing MassSpec on wheat