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Goals

Discussion items

TimeItemWhoNotes
MondayiPTMnetCecilia Arighiprotein post-translational modifications (PTMs) in systems biology context
 Protein Information Resource (PIR)Andrew Nightingale
  • Protein Ontology
  • UniProtKB
  • use cytoscape for visualization
  • UniProt contains PIR-PSD, Swiss-Prot, and TrEMBL databaes
 TopAnatFrederic Bastian
  • GO-like enrichment mapped to genes by expression
  • http://bgee.org
 GlycobiologJean-Philippe Gourdine

 

 CellosaurusAmos Bairoch

Cell lines
http://web.expasy.org/cellosaurus/

 OBO FoundryLynn Schriml
 ontology mappingMarie-Angelique Laporte
  • comparison of ontology mapping techniques to map traits
  • map CO to TO

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