Node | Motherboard version | Processor | Cores | Hyperthreading on? | RAM | Hard Drive |
|---|---|---|---|---|---|---|
| headnode | Supermicro X9DRW-iF v3.2 | Dual Xeon E5-2620v2 | 8 | N | 16GB |
3ware 9750-4i RAID controller - firmware FH9X 5.12.00.007 RAID1 setup on (2) 3TB drives and back-in-time setup on additional 3TB drive | ||||||
| rh001 | Asus DSBF-DE v1006 | Dual Xeon E5420 | 8 | N | 16GB | 1TB |
| rh002 | Asus DSBF-DE v1006 | Dual Xeon E5420 | 8 | N | 16GB | 1.5TB |
| rh003 | Asus DSBF-DE v1006 | Dual Xeon E5420 | 8 | N | 12GB | 1.5TB |
| rh004 | Supermicro Z8PE-D12 |
| v1401 | Dual Xeon E5520 | 8 | N | 12GB | 1.5TB |
| rh005 | Supermicro Z8PE-D12 |
| v1401 | Dual Xeon E5520 | 8 | N | 12GB | 1.5TB |
| rh006 | Supermicro Z8PE-D12 |
| v1401 | Dual Xeon E5520 | 8 | N | 12GB | 1.5TB |
| rh007 | Supermicro Z8PE-D12 |
| v1401 | Dual Xeon E5520 | 8 | N | 12GB | 1.5TB |
| rh008 | Supermicro Z8PE-D12 |
| v1401 | Dual Xeon E5520 | 8 | N | 12GB | 1.5TB |
| rh009 | Supermicro Z8PE-D12 |
| v1401 | Dual Xeon E5520 | 8 | N | 12GB | 1.5TB |
| rh010 | Supermicro Z8PE-D12 |
| v1401 | Dual Xeon E5520 | 8 | N | 12GB | 1.5TB | |
rh011 - previous HN | ? | ? | ? | ? | ? | ? |
| rh012 | Supermicro X9DRT-HF v3. |
| 3 | Dual Xeon E5-2620v2 | 12 | N | 32GB | 2TB |
| rh013 | Supermicro X9DRT-HF v3. |
| 3 | Dual Xeon E5-2620v2 | 12 | N | 32GB | 2TB |
| rh014 | Supermicro X9DRT-HF v3. |
| 3 | Dual Xeon E5-2620v2 | 12 | N | 32GB | 2TB |
| rh015 | Supermicro X9DRT-HF v3. |
| 3 | Dual Xeon E5-2620v2 | 12 | N | 32GB | 2TB |
| rh016 | Supermicro X9DRT-HF v3. |
| 3 | Dual Xeon E5-2620v2 | 12 | N | 32GB | 2TB |
| rh017 | Supermicro X9DRT-HF v3. |
| 3 | Dual Xeon E5-2620v2 | 12 | N | 32GB | 2TB |
| rh018 | Supermicro X9DRT-HF v3. |
| 3 | Dual Xeon E5-2620v2 | 12 | N | 32GB | 2TB |
| rh019 | Supermicro X9DRT-HF v3. |
| 3 | Dual Xeon E5-2620v2 | 12 | N | 32GB | 2TB | |
| rh020 | Supermicro X10DRT-H v1.0a | Dual Xeon E5-2630v3 | 16 | N | 64GB | 500GB |
| rh021 | Supermicro X10DRT-H v1.0a | Dual Xeon E5-2630v3 | 16 | N | 64GB | 500GB |
| rh022 | Supermicro X10DRT-H v1.0a | Dual Xeon E5-2630v3 | 16 | N | 64GB | 500GB |
| rh023 | Supermicro X10DRT-H v1.0a | Dual Xeon E5-2630v3 | 16 | N | 64GB | 500GB |
| rh024 | Supermicro X10DRT-H v1.0a | Dual Xeon E5-2630v3 | 16 | N | 64GB | 500GB |
| rh025 | Supermicro X10DRT-H v1.0a | Dual Xeon E5-2630v3 | 16 | N | 64GB | 500GB |
| rh026 | Supermicro X10DRT-H v1.0a | Dual Xeon E5-2630v3 | 16 | N | 64GB | 500GB |
| rh027 | Supermicro X10DRT-H v2.0 | Dual Xeon E5-2630v3 | 16 | N | 64GB | 500GB |
| Applications | Version |
|---|---|
| adf | 2012.01 & 2012.10.29 & 2013.01 & 2014.04ls |
| firefly | 71g & 8_beta_linux_openmpi_1.4 |
| gaussian | g03-E.01 & g09-A.02 & g09-C.01 & g09-D.01 |
| gv | 508 |
| intel compiler | 2015.0.090 |
| mathematica | 10.2.0 (removed 8/8/2016) |
| mopac | 2009 |
| mpich | 1.2.7.p1 |
| mpich2 | 1.4.1p1 |
| openmpi | 1.4.4 & 1.6.5 & 1.8.4 |
| phonopy | 1.6.1 |
| vasp | 5.3.5 |
| vmd | 1.8.7 |
| yaehmop | 3.0.3 |
To check sol head node hard drives status, go:
...
355886296KB px32
354069408KB tz265
10/18/2016: Lulu: No firmware update from Michael. There are no security updates available via YUM. Checked all hard drives are fine. Tried ddimage the root partition to an image file at external hard drive. Use sgdisk to backup disk partition table.
1/17/2017: Lulu: No firmware update from Michael. There are no security updates available via YUM. Checked all hard drives are fine. Forced fsck, no errors found. User's home data occupied 87% data partition. Checked root /usr & /var space, looks OK now.
4/18/2017: Lulu: No firmware update from Michael. There are no security updates available via YUM. Checked all hard drives are fine. User's home data occupied 93% data partition.
7/18/2017: Michael: no need to worry about any firmware on motherboards or RAID controller.
7/18/2017: Lulu: There are about 6 security updates via yum on head node. There are about four security updates on capsule but failed and aborted on updating. We got the version before yum update from Ezbackup and stored in /data/chroot/centos6-6-restore. We will see if we need revert it back to the version before update. Checked all hard drives are fine. Forced fsck,
1/16/2018: Lulu: No security updates via yum on head node. ("No packages needed for security;" - meltdown won't got patched by this) Checked all hard drives are fine. Forced fsck,
4/17/2018: Lulu: No security updates via yum on head node. Checked all hard drives are fine. Forced fsck, root partition was 90% full. Then I cleaned up many server and job logs. Root partition is 69% full. Cannot access 3ware web interface with error message "The server at 192.168.255.100 is taking too long to respond. 3ware commands working. Need more investigation.
10/16/2018: Michael did some firmware update on compute nodes. Michael replaced the router with EdgeRouter X. Lulu: No security updates via yum on head node. Checked all hard drives are fine. Forced fsck, Root partition is 77% full. Access 3ware web interface without problem.
1/17/2019: Lulu: No security updates via yum on head node. Checked all hard drives are fine. root partition was quite full. I cleaned up many server and job logs. Now root partition is 70% full.
4/16/2019: Michael:
- Update EdgeRouter X from 1.10.7 to 2.0.1
- Update headnode BIOS from 3.2 to 3.3
Lulu: Forced fsck. data is 93% full. rh001 cannot boot.
7/23/2019: Lulu: backintime /dev/sdb drive has I/O errors. I disabled mounting and disabled time machine for now. It has EZbackup now. data is 97% full. rh001 cannot boot.
10/15/2019: Lulu: forced fsck. backintime /dev/sdb drive has I/O errors.rh001 does not boot.
01/22/2020: Lulu: backintime /dev/sdb drive has I/O errors.rh001 does not boot