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A tip from a battle-hardened user: you have to be careful about recycling the log file when the topology of the geometry changes. For instance, if you change H2 and H3 such that the y-stiffeners become wider than the x-stiffeners, the topology changes significantly. In this case, unless you are a power user, it might be advisable to use the log file only for steps 1-3 (as you look through the log file, you should be able to hone in on where step 3 ends and step 4 begins).Then, go through steps 4-6 in the GUI and generate clean new lgw/input files.
Save: Toolbar > SAVE_DB