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Discussion items

TimeItemWhoNotes
 GrainGenesTanerupdate
 T3 loading Eduard's data 

review line names
2019_Diversity_90K
2019_Diversity_GBS
JBrowse

 T3 tools 

Subset markers by polymorphisms - no problem with 1000 accessions, performance is only limited by the start and stop range
Knetminer -
Download - use permanent link for GBS files 

 triticumbase
  • redesign home page
    which genotype experiments to load
    allow users to download genotype data (which formats) 
 T3 

2019_Diversity_90K
2019_Diversity_GBS 

review line names, look at subset tool to check if it will work with 1000 accessions

convert big VCF to hdf5 (check with GOBII) ask Star (ask second)

ask Lucas what is largest VCF that I can load (ask first)

check Akanov JBrowse (which data)

 WheatCAP Primer Design
Edwards 90K (not published), ask students if this data will be useful, how does this relate to wheatcap parents
Shiny App (ask Noah for update)
create accounts so users can test features. 

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