Date

Attendees

Goals

Discussion items

TimeItemWhoNotes
 T3 Barley report generatorKevin Smith, Dave Matthews
  • As we discussed, users would select lines, trials, and traits, then the datafarm would generate multi-trial means and an LSD/HSD for comparisons among lines for each trait. We are getting this years winter barley trials uploaded and could test it out with data already in T3 whenever you are ready.
  • see https://t3sandbox.org/t3/wheatplus/analyze/table.php  Ready to deploy?
 T3 Barley share code base with wheatDave Matthews, Clay Birkett

real differences: the color, whatsnew, toronto.php. git-incompatibility: merge problems will arise in some files, e.g. admin_header.php, curator/input_line_names_check.php

 interactive pedigrees on T3/Oat.Clare Saied 
 schedule dates for OS upgradeClay Birkett, David Haneinstall Ubuntu 14.04 on tcap machine
 updates on QTLNetMiner, QTL Harvesting, imputationClay Birkett et. al.display pvalue on JBrowse, look into how to use pvalue in meta analysis, colaborate with QTLNETminer developers
 update on combining genotype experimentsJean-Lucdiscuss next week
 new TCAP hardware? discuss next week
 PAG 2017 planing does our workshop overlap with "Plant Phenotypes"? should our session become "Computer Demo"?
 T3 BRAPI FlapJack
 streaming JSON objects  
 International collaborations on data WheatIS(several nodes around the world host index and links to resources), BRAPI, GOBII

Action items

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