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Date
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Goals
Discussion items
Time | Item | Who | Notes |
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| triticumbase | | genotype data - need to subset files over 90MB, Lucas is working on new loading script
- each experiment should have separate protocol and project (required for download and analysis)
- need method to check/QC loaded genotype data (vcf-stats from VCFtools?)
download page - error loading page "breeders/download" - /ajax/html/select/genotyping_protocols (not found) map viewer - added Comparative Map Viewer, slow working with large maps |
| T3 Oat | | cropontology.org how to add entries? |
| T3 gene annotation | Clay | - using BioMart v43
- added InterPro description
- Gene ontology is limited because many UniProt links are deleted, this should be fixed in next release
|
| T3 markers | Clay | Uniform marker names t3 marker 168K |
| T3 BLAST | Clay | web blast temporary files filling hard drive, now old files removed daily |
Action items