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Scientific Codes on the Cluster:
MPI Families
| OpenMPI | http://www.open-mpi.org | The Open MPI Project is an open source Message Passing Interface implementation that is developed and maintained by a consortium of academic, research, and industry partners. |
| MPICH | http://www.mpich.org | MPICH is a high-performance and widely portable implementation of the Message Passing Interface (MPI) standard (MPI-1, MPI-2 and MPI-3). |
Compiler Families
| GNU | http://gcc.gnu.org | GNU C compiler and support files. |
| LLVM | http://llvm.org | LLVM compiler infrastructure. |
Python
| SciPy | http://www.scipy.org | SciPy is a Python-based ecosystem of open-source software for mathematics, science, and engineering |
| NumPy | http://www.numpy.org | Base N-dimensional array package |
IO Libraries
| Adios | http://www.olcf.ornl.gov/center-projects/adios | The Adaptable IO System (ADIOS). |
| HDF5/PHDF5 | http://www.hdfgroup.org/HDF5 | A general purpose library and file format for storing scientific data. |
| NetCDF | http://www.unidata.ucar.edu/software/netcdf | Fortran, C, and C++ libraries for the Unidata network Common Data |
| PnetCDF | http://cucis.ece.northwestern.edu/projects/PnetCDF | A Parallel NetCDF library |
| ScionLib | http://www.fz-juelich.de/ias/jsc/EN/Expertise/Support/Software/SIONlib/_node.html | Scalable I/O Library for Parallel Access to Task-Local Files. |
Cluster HowTos:
- Login to the Cluster
- Loading Environments for Using Codes
- Submitting Jobs to the Cluster