Time | Item | Who | Notes |
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| GrainGenes update | | |
| T3 update | Clay | - update JBrowse to 1.12.4, minor improvements and bug fixes
set RevSeq for - public access
- RefSeq_v1 gene annotation v1.1
|
| Bulk download | Clay | Lines Records, Line Records in POOL |
| Variant Effects | Clay | added tutorial added transcript variants |
| PHG | | - 67 fastq from Kansas State Univ (EBI - ENA
) paired reads- ) Study: PRJNA227449
genotyping-by-sequencing (GBS) and exome capture on Illumina HiSeq 2000 - 298 fastq from Kansas State Univ (EBI -ENA) Study: PRJNA309190
genotyping-by-sequencing (GBS) on Illumina HiSeq 2000 - 17 fastq from Australia bpa-wheat-cultivars
fastq from- 199 Watkins bread wheat landrace collection (EBI - ENA) Study: PRJEB23320
gene based sequence capture (12Mb) to focus on the functionally relevant portion of the genome, followed by paired end sequencing on the Hiseq4000
|