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Serial/Threaded Libraries
R | http://www.r-project.org | R is a language and environment for statistical computing and graphics |
GSL | http://www.gnu.org/software/gsl | The library provides a wide range of mathematical routines such as random number generators, special functions and least-squares fitting. There are over 1000 functions in total. |
Metis | http://glaros.dtc.umn.edu/gkhome/metis/metis/overview | Serial Graph Partitioning and Fill-reducing Matrix Ordering. |
OpenBLAS | http://www.openblas.net | An optimized BLAS library based on GotoBLAS2. |
Plasma | https://bitbucket.org/icl/plasma | Parallel Linear Algebra Software for Multicore Architectures. |
Scotch | http://www.labri.fr/perso/pelegrin/scotch | Graph, mesh and hypergraph partitioning library. |
SuperLU | http://crd.lbl.gov/~xiaoye/SuperLU | A general purpose library for the direct solution of linear equations. |
Parallel Libraries
Boost | http://www.boost.org | Free peer-reviewed portable C++ source libraries. |
FFTW | http://www.fftw.org | Fast Fourier Transform library. |
Hypre | http://www.llnl.gov/casc/hypre | Scalable algorithms for solving linear systems of equations. |
MFEM | http://mfem.org | Lightweight, general, scalable C++ library for finite element methods. |
MUMPS | http://mumps.enseeiht.fr | A MUltifrontal Massively Parallel Sparse direct Solver. |
PETSC | http://www.mcs.anl.gov/petsc | Portable Extensible Toolkit for Scientific Computation. |
PT-SCOTCH | http://www.labri.fr/perso/pelegrin/scotch | Graph, mesh and hypergraph partitioning library using MPI. |
SLEPC | http://slepc.upv.es | A library for solving large scale sparse eigenvalue problems. |
SuperLU | http://crd.lbl.gov/~xiaoye/SuperLU | A general purpose library for the direct solution of linear equations. |
Trilinos | https://trilinos.org/ | An object-oriented software framework for the solution of large-scale, complex multi-physics engineering and scientific problems. |
Cluster HowTos:
- Login to the Cluster
- Loading Environments for Using Codes
- Submitting Jobs to the Cluster